Why do you have the BFS takeover light blinking for most of the entry without actually doing a BFS takeover?
Yep, indeed. In fact, it actually starts to blink as soon as you transit from OPS106 to OPS201, as expected as it cannot follow PASS. The official procedure is to do a I/O reset, and that works.
The problem is that it starts blinking again while transiting between OPS202 and OPS201 on orbit while the GPC5 is off. The only way to stop it is to do again the I/O reset, so switch ON GPC 5 again, I/O reset and switch it back to OFF. Here, after ISS undocking, the need to go to tail-to-sun attitude for freon cooling requires another transition between OPS202 and OPS201, which made it blink again. At that point, I let it blinked and focused on the rest
Dunno the real behaviour, maybe we could add a conditional on blinking if GPC5 is off?